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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800784.1_cds_XP_016471809.1_6380
CDS Infomation

[gene=LOC107793878] [db_xref=GeneID:107793878] [protein=short-chain dehydrogenase TIC 32, chloroplastic-like] [protein_id=XP_016471809.1] [location=complement(join(23617..23790,30463..30509,30595..30679,31289..31367,31465..31618,31758..31837,31919..32150,33408..33519))] [gbkey=CDS]
Sequence

ATGTTGAAGTTGATAACAGGTAGACCAGGTTCAAGTGGTTTTGGATCAGCTTCAACTGCT
GAACAAGTTACTGATGGCATTGATGGGTCCAATCTCACCGCCATTGTTACAGGAGGTGCA
AGCGGCATTGGTTTGGAGACAGCAAGAGTTTTAGCTTTGAGAAATGTCCATGTTATTATT
GCAGCAAGAAATATGGAGGCTGCAAATGAAGCAAAACAGCGTATTCTCAAGGACAATAAT
GCTGCTCGTGTCGATATTGAGAAACTTGACCTGAGCTCAATTAGATCAGTGAAGGCATTC
GCTGATAAATTCAAAGCACTTAACCTTCCTCTCAATATCTTAATAAACAATGCAGGTATC
ATGTTCTGTCCATTTCAACTTTCAGAAGATGGCATAGAGATGCAATTCGCCACAAATCAT
ATAGGTCATTTCTACTTGACTAACCTTCTTATAGACAAAATGAAGGAAACATCAAAAGCT
ACTGGTATTCAGGGTAGGATTGTGAACCTGTCATCACTACTTCATCAGTACCCATATGAA
GAAGGAATACAATTTAACAAAATCAGTGACAAGAGCAGTTATCAAGAAAGACTAGCATAT
GGGCAATCCAAATTAGCCAACCTATTGCATTCCAATGAACTTTCTCGTCGTTTGCAGGAA
GAGGGAGCAAATATTACTGTCAATTCAGTGCATCCAGGTCTAATAATGACAAACCTCATG
AGACATTCTGCTCTTTCGATGAAAATCTTTAGGGCTTTCACTTGTTTCATGTGGAAGAAT
GTCTCTCAGGGAGCAGCTACAACATGCTATGCTGCCCTCCATCCAAGTCTAAAAGGCGTC
ACTGGAAAGTATTTCGTTGACTGCAATGAGCATGAGCCAAGCAAGCTAGCACAAGACGAA
GCTTTAGCTCGAAACCTTTGGGATGTCAGTAACAACTTGATCAATGCAGCTTTAAAGAGT
TGA

Peptide Sequence

PEP ID

XP_016471809.1
PEP Infomation

PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Nicotiana tabacum]
Sequence

MLKLITGRPGSSGFGSASTAEQVTDGIDGSNLTAIVTGGASGIGLETARVLALRNVHVII
AARNMEAANEAKQRILKDNNAARVDIEKLDLSSIRSVKAFADKFKALNLPLNILINNAGI
MFCPFQLSEDGIEMQFATNHIGHFYLTNLLIDKMKETSKATGIQGRIVNLSSLLHQYPYE
EGIQFNKISDKSSYQERLAYGQSKLANLLHSNELSRRLQEEGANITVNSVHPGLIMTNLM
RHSALSMKIFRAFTCFMWKNVSQGAATTCYAALHPSLKGVTGKYFVDCNEHEPSKLAQDE
ALARNLWDVSNNLINAALKS

Transcript Sequence

Gene sequence data has not been registered.